Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMEKQYRVLLYYKYVPIEDPEAFREQHLAFCKELGLLGRILVSSEGINGTVSGTVEQTEKYMETMKADPRFADMVFKIDEAEGHAFKKIFVRHKKELVTLRLEDDVDPNETTGQHLKPAEFYEKMQDPNTIVIDARNDYEYDLGHFRGAVRPDIEAFRELPEWIEEHKDMLE-GKKILTYCTGGVRCEKFSGWLVKQGFEDVAQLDGGIVTYGKDPEVQGKLWDGQCYVFDERISVPVNRVEHVIVGKDYFTGEPCERYVNCANPSCNKKMICTPENEYKYMRSCSHECRTNPRNLYVKEHNMTEEEVNARLAAIETEDHAAAE
3K9R Chain:A ((33-112))-----------------------------------------------------------------------------------------------------------------------------EPAFTILDVRDRSTYNDGHIMGAMAMPIEDL------VDRASSSLEKSRDIYVYGAGDEQTSQAVNLLRSAGFEHVSELKGGLAAW----------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3K9R.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 349 -54850 -157.16 -694.30
target 2D structure prediction score : 0.53
Monomeric hydrophicity matching model chain A : 0.62

3D Compatibility (PKB) : -157.16
2D Compatibility (Sec. Struct. Predict.) : 0.53
1D Compatibility (Hydrophobicity) : 0.62
QMean score : 0.525

(partial model without unconserved sides chains):
PDB file : Tito_3K9R.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3K9R-query.scw
PDB file : Tito_Scwrl_3K9R.pdb: