Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMFHISTLDQIKIAYIGGGSQGWARSLMS---DLSIDERMSGTVALYDLDFEAAQKNEVIGNHSGNGRWRYEAVSTLKKALSAADIVIISILPGSLDDMEVDVHLPERCGIYQSVGDTVGPGGIIRGLRAVPIFAEIARAIRDYAPESWVINYTNPMSVCTRVLYKVFPGIKAIGCCHEVFGTQKLLAEMVTERLGIEVPRREDIRVNVLGINHFTWITKASYRHIDLL-PIFREFSAHYGESGYELEGECWRDSVFCSAHRVAFDLFETYGAIPAAGDRHLAEFLPGPYLKQPEVWKFHLTPISFRKQDRAEKRQETERLIVQQRGVAE-----KASGEEGVNIIAALLGLGELVTN------VNMPNQGQVLNLPIQAIVETNAFITRNRVQPILSGALPKGVEM-LAARHISN--QEAVADAGLTKDTGLAFQAFLNDPLVQIDRSDAEQLFNDMLQCIMQS
1UP4 Chain:A ((2-407))----------RIAVIGGGSS-YTPELVKGLLDISEDVRID-EVIFYDIDEEKQKIVVDFVKRLVKDRFKVLISDTFEGAVVDAKYVIFQFRPGGLKGRENDEGIPLKYGLIGQ--ETTGVGGFSAALRAFPIVEEYVDTVRK-TSNATIVNFTNPSGHITEFVRNYLEYEKFIGLCNVPINFIREIAEMFSARL-------EDVFLKYYGLNHLSFIEKVFVKGEDVTEKVFENLKLK-----DEDFPTWFYDSV---------------------------RLIVNPYLRYYLMEKKMFKKISTHELRAREVMKIEKELFEKYRTAVEIPEELTKRGGSMYSTAAAHL-IRDLETDEGKIHIVNTRNNGSIENLPDDYVLEIPCYVRSGRVHTLSQG---KGDHFALSFIHAVKMYERLTIEAYLKRSKKLALKALLSHPLGP-DVEDAKDLLEEILEA----


General information:
TITO was launched using:
RESULT:

Template: 1UP4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 2064 -203135 -98.42 -530.38
target 2D structure prediction score : 0.57
Monomeric hydrophicity matching model chain A : 0.70

3D Compatibility (PKB) : -98.42
2D Compatibility (Sec. Struct. Predict.) : 0.57
1D Compatibility (Hydrophobicity) : 0.70
QMean score : 0.439

(partial model without unconserved sides chains):
PDB file : Tito_1UP4.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1UP4-query.scw
PDB file : Tito_Scwrl_1UP4.pdb: