Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMGNYLSVAVELVCGLGILFIILKLLGKTQFSQITPFDFISALILGELVGNAVYDHEIKIKEIIFASLLWGVLIYIIEFITQKMKSSRKFLEGEPNIVIRKGELQYKVMKKNKIDINQLQSLLRQAGSFSIQEVEYAILETNGMVSVLPKSDFDKPTNKDLQIPSKSVSLPITLIIDGEIVRDNLKEAGVDEQWLKQELKKKNIDKTEDVLFAEWHKNKPLYTVTYEQSRST
3C6F Chain:B ((16-152))---------------------------------------------------------------------------------------------PNIVIRKGELQYKVMKKNKIDINQLQSMLRQAGSFSIQEVEYAIMETNGMVSVLPKSDFDKPTNKDMQIPSKSVSLPITLIIDGEIVRDNLKEAGVDEQWLKQEMKKKNIDKTEDVLFAEWHKNKPLYTVTYEQSRS-


General information:
TITO was launched using:
RESULT:

Template: 3C6F.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 447 -69069 -154.52 -504.15
target 2D structure prediction score : 0.69
Monomeric hydrophicity matching model chain B : 0.74

3D Compatibility (PKB) : -154.52
2D Compatibility (Sec. Struct. Predict.) : 0.69
1D Compatibility (Hydrophobicity) : 0.74
QMean score : 0.685

(partial model without unconserved sides chains):
PDB file : Tito_3C6F.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3C6F-query.scw
PDB file : Tito_Scwrl_3C6F.pdb: