Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKVNKFITIYKDIAQQIEGGRWKAEEILPSEHELTAQYGTSRETVRKALHMLAQNGYIQKIRGKGSVVLNREKMQFPVSGLVS--FKELAQTLGKETKTTVHKFGLEPPSELIQKQLRANLDDDIWEVIRSRKIDGEHVILDKDYFFRKHVPHLTKEICENSIYEYIEGELGLSISYAQKEIVAEPCTDEDRELLDLRGYDHMVVVRNYVFLEDTSLFQYTESRHRLDKFRFVDFARRGK
3BWG Chain:A ((8-231))------QQIATEIETYIEEHQLQQGDKLPVLETLMAQFEVSKSTITKSLELLEQKGAIFQVRGSG-IFVRKHKRKGYISLLSNQG------DFNVTSK--VIELDVRKPTPEAAENLNIGMDEDIYYVKRVRYINGQTLCYEESYYTKSIVTYLNNEIVSHSIFHYIREGLGLKIGFSDLFLHVGQLNEEEAEYLGLEAGLPKLYIESIFHLTNGQPFDYSKISYNYEQSQFV-------


General information:
TITO was launched using:
RESULT:

Template: 3BWG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 943 -98848 -104.82 -457.63
target 2D structure prediction score : 0.54
Monomeric hydrophicity matching model chain A : 0.74

3D Compatibility (PKB) : -104.82
2D Compatibility (Sec. Struct. Predict.) : 0.54
1D Compatibility (Hydrophobicity) : 0.74
QMean score : 0.468

(partial model without unconserved sides chains):
PDB file : Tito_3BWG.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3BWG-query.scw
PDB file : Tito_Scwrl_3BWG.pdb: