Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKMSLFQNMKSKLLPIAAVSVLTAGIFAGAELQQTEKASAKKQDKAEIRNVIVMIGDGMGTPYIRAYRS--------MKNNGDTPNNPKLTEFDRNL-TGMMMTHPDDPDYNITDSAAAGTALATGVKTYNNAIGVDKNGKKVKSVLEEAKQQGKSTGLVATSEINHATPAAYGAHNESRKNMDQIANSY------MDDKIKGK-------HKIDVLLGGGKSYFNR-------KDRNLTKEFKQAGYSYVTTKQAL----KKNKDQQVLGLFADGGL------AKAL----------------DRDSKTPSLKDMTVSAIDRLNQNKKGFFLMVEGSQIDWAAHDNDTVGAMSEVKDFEQAYKAAIEFAKKDKHTLVIATADHTTGGFTIGANGEKNWHAEPILSAKKTPEFMAKKISEGKPVKD---VLARYANLKVTSEEIKSVEAAAQADKSKGASKAIIKIFNTRSNSGWTSTDHTGEEVPVYAYGPGKEKFRGLINNTDQANIIFKILKTGK
1KHJ Chain:A ((43-437))-------------------------------------------------KNIILLIGDGMGDSEITAARNYAEGAGGFFKGIDALPLTGQYTHYALNKKTG-------KPDY-VTDSAASATAWSTGVKTYNGALGVDIHEKDHPTILEMAKAAGLATGNVSTAELQHATPAALVAHVTSRKCYGPSATSQKCPGNALEKGGKGSITEQLLNARADVTLGGGAKTFAETATAGEWQGKTLREEAEARGYQLVSDAASLNSVTEANQQKPLLGLFADGNMPVRWLGPKATYHGNIDKPAVTCTPNPQRNDSVPTLAQMTDKAIELLSKNEKGFFLQVEGASIDKQNHAANPCGQIGETVDLDEAVQRALEFAKKEGNTLVIVTADHA--------------HASQIVA----PDTKAPGLTQALNTKDGAVMVMSYGN----SEE--------------------------------DSQEHTGSQLRIAAYGPHAANVVGLTDQTD-------------


General information:
TITO was launched using:
RESULT:

Template: 1KHJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 2091 -19923 -9.53 -59.12
target 2D structure prediction score : 0.59
Monomeric hydrophicity matching model chain A : 0.72

3D Compatibility (PKB) : -9.53
2D Compatibility (Sec. Struct. Predict.) : 0.59
1D Compatibility (Hydrophobicity) : 0.72
QMean score : 0.378

(partial model without unconserved sides chains):
PDB file : Tito_1KHJ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1KHJ-query.scw
PDB file : Tito_Scwrl_1KHJ.pdb: