Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKRHYEAVVIGGGIIGSAIAYYLAKENKNTALFESGTMGGRTTSAAAGMLGAHAECEERDAFFDFAMHSQRLYKGLGEELYALSGVDIRQHNGGMFKLAFSEEDVLQLRQMDDL-----------DSVSWYSKEEVLEKEPYASGDIFGASFIQDDVHVEPYFVCKAYVKAAKMLGAEIFEHTPVLHVERDGEALFIKTPSGDVWANHVVVASGVWSGMFFKQLGLNNAFLPVKGECLSVWNDDIPLTKT--LYHDHCYIVPRKSGRLVVGATMKPGDWSETPDLGGLESVMKKAKTMLPAIQNMKVDRFWAGLRPGTKDGKPYIGRHPEDSRILFAAGHFRNGILLAPATGALISDLIMNKEVNQDWLHAFRIDRKEAVQI
4YSH Chain:A ((21-368))--------------------FELAKRRHRVAIFEKGTMGSGASSAAAGMLGAQSEFSTSSPLVPLALQSRALMPALAEELRERTGIDIGLVEKGLIKLATTEEEA------DDLYRHYTFWRGIGEPVQWLTKGEALEMEPRLAEALAGAMYIPGDGQVSAPDLAAALAYAAASAGACLYEYTEVFDIRSDSSGHVLDTTGGTFAAEAVVIASGAWAARLGARVGLSLSVYPVKGECVMV-RAPVPLLQTTVFAKNGCYIVPKSGNRLLIGATSTPGTFDRRVSAGGVMNLLHRAAHLVPDIEQAEWVASWSGIRPQTEDGLPYLGEHPERRGLFVAAGHYRNGILLSPLTGLLVADLVERKETAFD-LAPFSLTR------


General information:
TITO was launched using:
RESULT:

Template: 4YSH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1879 -199826 -106.35 -596.49
target 2D structure prediction score : 0.61
Monomeric hydrophicity matching model chain A : 0.78

3D Compatibility (PKB) : -106.35
2D Compatibility (Sec. Struct. Predict.) : 0.61
1D Compatibility (Hydrophobicity) : 0.78
QMean score : 0.510

(partial model without unconserved sides chains):
PDB file : Tito_4YSH.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4YSH-query.scw
PDB file : Tito_Scwrl_4YSH.pdb: