Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMVLFFQIMVWCIVAGLGLYVYATWRFEAKVKEKMSAIRKTWYLLFVLGAMVYWTYEPTSLFTHWERYLIVAVSFALIDAFIFLSAYVKKLAGSELETDTREILEENNEMLHMYLNRLKTYQYLLKNEPIHVYYGSIDAYAEGIDKLLKTYADKMNLTASLCHYSTQADKDRLTEHM--DDPADVQTRLDRKDVYYDQYGKVVLIPFTIETQNYVIKLTSDSIVTEFDYLLFTSLTSIYDLVLPIEEEGEG
2Y8P Chain:A ((105-191))--------------------------------------------------------------------------------------------SELKNPERNI-----SMGAAYLNILETGPLAGIEDPKVLQYALVVSYANGAGALLRTFSSDRKKAISKIN---DLDADEFLEHVARNHPAPQAPR---------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 2Y8P.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 263 -19308 -73.41 -227.15
target 2D structure prediction score : 0.61
Monomeric hydrophicity matching model chain A : 0.50

3D Compatibility (PKB) : -73.41
2D Compatibility (Sec. Struct. Predict.) : 0.61
1D Compatibility (Hydrophobicity) : 0.50
QMean score : 0.367

(partial model without unconserved sides chains):
PDB file : Tito_2Y8P.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2Y8P-query.scw
PDB file : Tito_Scwrl_2Y8P.pdb: