Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSGKKKESGKFRSVLLIIILPLMFLLIAGGIVLWAAGINVLKPIQDAAAKTPVLKELVPETENKKGAASSKD-SSNTAALEKTIKDQKSEISILNKDLETSKSEIDRLNQKIRSLEKTAEDQKKSSEDHTEGSADSKASSENDKVISVYKSMDSGKAAKIIAQLKEQEALKILNGLSKKQLADILAKMTPEQAATYTEKIAASQE
3EYJ Chain:B ((27-128))-------------------------------------------------------------QNAEGTGTAADLKSTQAAIDQINGKLNRLIEKTNEKYHQIEKEFEQVEGRIQDLEKYVEDTKI---DLWSYNAELLVALENQHTIDVTDSEMNKLFERVRRQLRE---------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3EYJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 100 13773 137.73 136.37
target 2D structure prediction score : 0.44
Monomeric hydrophicity matching model chain B : 0.59

3D Compatibility (PKB) : 137.73
2D Compatibility (Sec. Struct. Predict.) : 0.44
1D Compatibility (Hydrophobicity) : 0.59
QMean score : 0.349

(partial model without unconserved sides chains):
PDB file : Tito_3EYJ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3EYJ-query.scw
PDB file : Tito_Scwrl_3EYJ.pdb: