Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNFLLDLFTNWTFDKVLDYTLAAVIWSVFKSRSKQNKYPGYFEKIRRYRNLHPLLRSLSMRVLLSITIHPYMFS
2WWB Chain:L ((3-19))----------------------KQSLDVSSDRRKARKAY-----------------------------------


General information:
TITO was launched using:
RESULT:

Template: 2WWB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain L - contact count / total energy / energy per contact / energy per residue : 10 1649 164.90 97.00
target 2D structure prediction score : 0.18
Monomeric hydrophicity matching model chain L : 0.45

3D Compatibility (PKB) : 164.90
2D Compatibility (Sec. Struct. Predict.) : 0.18
1D Compatibility (Hydrophobicity) : 0.45
QMean score : 0.124

(partial model without unconserved sides chains):
PDB file : Tito_2WWB.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2WWB-query.scw
PDB file : Tito_Scwrl_2WWB.pdb: