Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMVKKALIVILILLPFVQLALLPLVNRIEPIMFGLPFFHFWLLLWIIVTPLCSFGIYQMQKKDGGLE
1VRY Chain:A ((17-44))----------------------GSRASLPKVSYVKAIDIWLAVCLLFVFS----------------


General information:
TITO was launched using:
RESULT:

Template: 1VRY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 34 -7740 -227.65 -276.43
target 2D structure prediction score : 0.57
Monomeric hydrophicity matching model chain A : 0.50

3D Compatibility (PKB) : -227.65
2D Compatibility (Sec. Struct. Predict.) : 0.57
1D Compatibility (Hydrophobicity) : 0.50
QMean score : 0.403

(partial model without unconserved sides chains):
PDB file : Tito_1VRY.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1VRY-query.scw
PDB file : Tito_Scwrl_1VRY.pdb: