Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAYNKEEKIKSLNRMQYEVTQNNGTEPPFQNEYWDHKEEGLYVDIVSGKPLFTSKDKFDSQCGWPSFTKPIE-EEVEEKLDTSHGMIRTEVRSRTADSHLGHVFNDGP-GPNGLRYCINSAALRFVPKHKLKEEGYESYLHLFNK
3HCG Chain:A ((12-138))---------RTLTEEQYQVTQNSATEYAFSHEYDHLFKPGIYVDVVSGEPLFSSADKYDSGCGWPSFTRPIDAKSVTEHDDFSYNMRRTEVRSHAADSHLGHVFPDGPRDKGGLRYCINGASLKFIPLEQMDAAGY---------


General information:
TITO was launched using:
RESULT:

Template: 3HCG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 634 -7964 -12.56 -63.71
target 2D structure prediction score : 0.50
Monomeric hydrophicity matching model chain A : 0.83

3D Compatibility (PKB) : -12.56
2D Compatibility (Sec. Struct. Predict.) : 0.50
1D Compatibility (Hydrophobicity) : 0.83
QMean score : 0.470

(partial model without unconserved sides chains):
PDB file : Tito_3HCG.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3HCG-query.scw
PDB file : Tito_Scwrl_3HCG.pdb: