Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTMFVESINDVLFLVDFFTIILPALTAIGIAFLLRECRAGEQWKSKRTDEHQTVFHINRTDFLIIIYHRITTWIRKVFRMNSPVN-DEEDAGSLLL
2J9W Chain:A ((178-205))-------------------------------------------------------------------EKVSQWLQKLSSMSASDELDDSQVRQML-


General information:
TITO was launched using:
RESULT:

Template: 2J9W.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 26 131 5.02 4.83
target 2D structure prediction score : 0.74
Monomeric hydrophicity matching model chain A : 0.52

3D Compatibility (PKB) : 5.02
2D Compatibility (Sec. Struct. Predict.) : 0.74
1D Compatibility (Hydrophobicity) : 0.52
QMean score : 0.593

(partial model without unconserved sides chains):
PDB file : Tito_2J9W.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2J9W-query.scw
PDB file : Tito_Scwrl_2J9W.pdb: