Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMDSIEKVSKNLIEEAYLTKASDIHIVPRERDAIIHFRVDHALLKKRDMKKEECVRLISHFKFLSAMDIGERRKPQNGSLTLKLKEGNVHLRMSTLPTINEESLVIRVMPQYNIPSIDKLSLFPKTGAT------LLSFLKHSHGMLIFTGPTGSGKTTTLYSLVQYAKKHFNRNIVTLEDPVETRDEDVLQVQVNEKAGVTYSAGLKAILRHDPDMIILGEIRDAETAEIAVRAAMTGHLVLTSLHTRDAKGAIYRLLEFGINMNEIEQTVIAIAAQRLVDLACPFCENGCSSVYCRQSRNTRRASVYELLYGKNLQQCIQEAKGNHANYQYQTLRQIIRKGIALGYLTTNNYDRWVYHEKD
1P9W Chain:A ((43-316))-------------EAIKEGASDIHIETFEKTLSIRFRVDGVLREVLAPSRKLSSLLVSRVKVMAKLDIAEKRVPQDGRISLRIG--AVDVRVSTMPSSHGERVVMRLLDK-NATRLDLHSL----GMTAHNHDNFRRLIKRPHGIILVTGPTGSGKSTTLYAGLQELNSS-ERNILTVEDPIEFDIDGIGQTQVNPRVDMTFARGLRAILRQDPDVVMVGEIRDLETAQIAVQASLTGHLVMSTLHTNTAVGAVTRLRDMGIEPFLISSSLLGVLAQRLVRTLCPDCK--------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 1P9W.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1174 3242 2.76 12.42
target 2D structure prediction score : 0.62
Monomeric hydrophicity matching model chain A : 0.77

3D Compatibility (PKB) : 2.76
2D Compatibility (Sec. Struct. Predict.) : 0.62
1D Compatibility (Hydrophobicity) : 0.77
QMean score : 0.482

(partial model without unconserved sides chains):
PDB file : Tito_1P9W.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1P9W-query.scw
PDB file : Tito_Scwrl_1P9W.pdb: