Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMMKATIVLDAKGLACPMPIVKTKKRMKDLKAGEVLEIHATDKGSTADLEAWAKSTGHEYLGTEAEGEILRHFLRKGGEHSSENASSIPEISLEAFKQKVDSDESLNILDVREIEEYEKAHIPGVVHIPLGEVEKRANELNENDEIYIICHSGRRSEMAARTMKKQGFKKVINVVPGMRDWTGKTE
3FOJ Chain:A ((4-84))-----------------------------------------------------------------------------------------ITVTELKEKILDANPVNIVDVRTDQETAMGIIPGAETIPMNSIPDNLNYFNDNETYYIICKAGGRSAQVVQYLEQNGVNAV---------------


General information:
TITO was launched using:
RESULT:

Template: 3FOJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 269 -43490 -161.67 -536.91
target 2D structure prediction score : 0.62
Monomeric hydrophicity matching model chain A : 0.65

3D Compatibility (PKB) : -161.67
2D Compatibility (Sec. Struct. Predict.) : 0.62
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.732

(partial model without unconserved sides chains):
PDB file : Tito_3FOJ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3FOJ-query.scw
PDB file : Tito_Scwrl_3FOJ.pdb: