Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKRFSTAYLLLGILCSAAVFLIGAPSRALGAEVEHYEPLQVHVQLEKVYLDGDVSIEHKHEKVFSMDDFWAAYAGWTLVEQKKGYVLFRKQMDDISPLSKVNGYIGVSDNGVISTFHGRPEPASEP-IQSFFQIDLERLESHMQKNLLKGIPFRTKAEFEDVIEHMKTYSG
3KVP Chain:A ((27-62))--------------------------------------------------------------------------------------------------LEHN-HFGVMEDGYIKIYEYNESR-NEVKLKKEYADDE-----------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3KVP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 90 -2544 -28.27 -72.69
target 2D structure prediction score : 0.40
Monomeric hydrophicity matching model chain A : 0.53

3D Compatibility (PKB) : -28.27
2D Compatibility (Sec. Struct. Predict.) : 0.40
1D Compatibility (Hydrophobicity) : 0.53
QMean score : 0.413

(partial model without unconserved sides chains):
PDB file : Tito_3KVP.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3KVP-query.scw
PDB file : Tito_Scwrl_3KVP.pdb: