Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKAERGASPKQIKPHRYYLLAVH
3JAM Chain:N ((38-50))IKYARKGLTPSQI-----------


General information:
TITO was launched using:
RESULT:

Template: 3JAM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain N - contact count / total energy / energy per contact / energy per residue : 12 -1017 -84.75 -78.23
target 2D structure prediction score : 1.00
Monomeric hydrophicity matching model chain N : 0.67

3D Compatibility (PKB) : -84.75
2D Compatibility (Sec. Struct. Predict.) : 1.00
1D Compatibility (Hydrophobicity) : 0.67
QMean score : 0.965

(partial model without unconserved sides chains):
PDB file : Tito_3JAM.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3JAM-query.scw
PDB file : Tito_Scwrl_3JAM.pdb: