Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMPRVKGGTVTRKRRKKVLKLAKGYFGSKHTLYKVANQQVMKSGNYAFRDRRQKKRDFRKLWITRINAAARMNGLSYSRLMHGLKLSGIEVNRKMLADLAVNDLTAFNQLADAAKAQLNK
4WFA Chain:N ((2-117))-PRVKGGTVTRARRKKTIKLAKGYFGSKHTLYKVAKQQVMKSGQYAFRDRRQRKRDFRKLWITRINAAARQHEMSYSRLMNGLKKAGIDINRKMLSEIAISDEKAFAQLVTKAKDAL--


General information:
TITO was launched using:
RESULT:

Template: 4WFA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain N - contact count / total energy / energy per contact / energy per residue : 273 -31115 -113.97 -268.23
target 2D structure prediction score : 0.80
Monomeric hydrophicity matching model chain N : 0.92

3D Compatibility (PKB) : -113.97
2D Compatibility (Sec. Struct. Predict.) : 0.80
1D Compatibility (Hydrophobicity) : 0.92
QMean score : 0.574

(partial model without unconserved sides chains):
PDB file : Tito_4WFA.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4WFA-query.scw
PDB file : Tito_Scwrl_4WFA.pdb: