Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMGNTRKKVSVIGAGFTGATTAFLIAQKELADVVLVDIPQLENPTKGKALDMLEASPVQGFDAKITGTSNYEDTAGSDIVVITAGIARKPGMSRDDLVSTNEKIMRSVTQEIVKYSPDSIIVVLTNPVDAMTYAVYKESGFPKERVIGQSGVLDTARFRTFVAEELNLSVKDVTGFVLGGHGDDMVPLVRYSYAGGIPLETLIPKERIDAIVERTRKGGGEIVNLLGNGSAYYAPAASLTEMVEAILKDQRRVLPTIAYLEGEYGYEGIYLGVPTIVGGNGLEQIIELELTDYERAQLNKSVESVKNVMKVLS
1UXJ Chain:A ((2-306))----RKKISIIGAGFVGSTTAHWLAAKELGDIVLLDI--VEGVPQGKALDLYEASPIEGFDVRVTGTNNYADTANSDVIVVTSGAP---------LIKVNADITRACISQAAPLSPNAVIIMVNNPLDAMTYLAAEVSGFPKERVIGQAGVLDAARYRTFIAMEAGVSVKDVQAMLMGGHGDEMVPLPRFSTISGIPVSEFIAPDRLAQIVERTRKGGGEIVNLLKTGSAYYAPAAATAQMVEAVLKDKKRVMPVAAYLTGQYGLNDIYFGVPVILGAGGVEKILELPLNEEEMALLNASAKAVRATLDTL-


General information:
TITO was launched using:
RESULT:

Template: 1UXJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1734 -226441 -130.59 -765.00
target 2D structure prediction score : 0.64
Monomeric hydrophicity matching model chain A : 0.88

3D Compatibility (PKB) : -130.59
2D Compatibility (Sec. Struct. Predict.) : 0.64
1D Compatibility (Hydrophobicity) : 0.88
QMean score : 0.537

(partial model without unconserved sides chains):
PDB file : Tito_1UXJ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1UXJ-query.scw
PDB file : Tito_Scwrl_1UXJ.pdb: