Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMIVEQIMKRDVITLTKTDTLETAICKLKEFHIRHLPVVDEERHVIGMITDRDMKQASPSIFEENKRSLFLTRSVDSIMKKDVVCAHPLDFVEEISAVFYEHGIGCLPVV-HHQKLIGILTKTDLLRTFVKLTGADQPGSQIEIKVNDITKSLAEISSLCQDLQVKILSVLVYPHDDPGVKVLVFRVKTMNPLPFLQALQRNGHHVVWPSEQRDLL
3KPB Chain:A ((2-118))-LVKDILSKPPITAHSNISIMEAAKILIKHNINHLPIVDEHGKLVGIITSWDIAKA----LAQNK------KTIEEIMTRNVITAHEDEPVDHVAIKMSKYNISGVPVVDDYRRVVGIVTSEDISRLF---------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3KPB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 512 -75910 -148.26 -654.39
target 2D structure prediction score : 0.52
Monomeric hydrophicity matching model chain A : 0.65

3D Compatibility (PKB) : -148.26
2D Compatibility (Sec. Struct. Predict.) : 0.52
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.593

(partial model without unconserved sides chains):
PDB file : Tito_3KPB.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3KPB-query.scw
PDB file : Tito_Scwrl_3KPB.pdb: