Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMVTVREAKLEDIKDIAKVHVDSWRTT---YHEIIPIDYLNSLNYKEFEDKWKSRSLKGVFVAQDEKGSVFGFASFGPIRSEQEGYDGEL-YAIYLLEERQRQGAGRALLAKGAEFLLQHGFSSMFVWVIEQNPSIIFYQAYSPERVAEDNFEIAGVRLKEVGLG---WPDLSALKTLLNR
2J8N Chain:A ((4-166))--SIRDAGVADLPGILAIYNDAVGNTTAIWNET-PVDLANRQAWFDA----RARQGYPILVASDAAGEVLGYASYGDWRPF-EGFRGTVEHSVYVRDDQRGKGLGVQLLQALIERARAQGLHVMVAAIESGNAASIGLH----RRLG---FEISG-QMPQVGQKFGRWLDLTFMQLNLD-


General information:
TITO was launched using:
RESULT:

Template: 2J8N.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 632 -10294 -16.29 -65.98
target 2D structure prediction score : 0.59
Monomeric hydrophicity matching model chain A : 0.74

3D Compatibility (PKB) : -16.29
2D Compatibility (Sec. Struct. Predict.) : 0.59
1D Compatibility (Hydrophobicity) : 0.74
QMean score : 0.452

(partial model without unconserved sides chains):
PDB file : Tito_2J8N.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2J8N-query.scw
PDB file : Tito_Scwrl_2J8N.pdb: