Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAAKFEVGSVYTGKVTGLQAYGAFVALDEETQGLVHISEVTHGFVKDINEHLSVGDEVQVKVLAVDEEKGKISLSIRATQAAPE-KKESKPRKPKAAQVSEEAST---PQGFNTLKDKLEEWIEMSNRKDLIKK
4NNH Chain:A ((293-405))------IGQIVPGKVTKLVPFGAFVRVEEGIEGLVHISELSER---VPDQVVQVGDDAMVKVIDIDLERRRISLSLK--QANEDYTEEFDPSKYGMADSYDEQGNYIFPEGFDP---ETNEWLE----------


General information:
TITO was launched using:
RESULT:

Template: 4NNH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 390 -35737 -91.63 -337.14
target 2D structure prediction score : 0.55
Monomeric hydrophicity matching model chain A : 0.76

3D Compatibility (PKB) : -91.63
2D Compatibility (Sec. Struct. Predict.) : 0.55
1D Compatibility (Hydrophobicity) : 0.76
QMean score : 0.514

(partial model without unconserved sides chains):
PDB file : Tito_4NNH.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4NNH-query.scw
PDB file : Tito_Scwrl_4NNH.pdb: