Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSAFTLYPAIDMRNGKCVRLVQGDYNKETIYGDSPYDMAELFEKEGAEWIHLVDLDGAKEGKRVNDRHVIEIAQKLNLKVEIGGGIRSENDVYEYLSAGVERVILGSSAVSNPPFVKKMLKQYGEKIAIGLDARNGFVSTEGWLETSTLKATELGKELANEGAEVFIFTDIATDGMLSGPNVKSTVELAKETGKSVIASGGVSSVADLEALARNEADGVSGAIIGKALYTNQFTLSEALERVKRK
4TX9 Chain:A ((8-248))LSRLELLPAVDVRDGQAVRLVHGESGTETSYG-SPLEAALSWQRAGAEWLHLVDLDAAF-GTGDNRELVRQVTEAMDIKVELSGGIRDDASLAAALATGCTRVNLGTAALESPEWVAKVIAEHGDRIAVGLDVRGTTLKGRGWTSEGG-DLYEALERLDKEGCARYVVTDIAKDGTLQGPNLELLRNVCAATDRPVVASGGVSSLDDLRAIAELVPLGVEGSIVGKALYAKAFTLEEALEAVAQ-


General information:
TITO was launched using:
RESULT:

Template: 4TX9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1417 -110503 -77.98 -458.52
target 2D structure prediction score : 0.75
Monomeric hydrophicity matching model chain A : 0.84

3D Compatibility (PKB) : -77.98
2D Compatibility (Sec. Struct. Predict.) : 0.75
1D Compatibility (Hydrophobicity) : 0.84
QMean score : 0.678

(partial model without unconserved sides chains):
PDB file : Tito_4TX9.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4TX9-query.scw
PDB file : Tito_Scwrl_4TX9.pdb: