Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMIDIHCHILPAMDDGAGDSADSIEMARAAVRQGIRTIIATPHHNNGVYKNEPAAVREAADQLNKRLIKEDIP--LHVLPGQEIRIYGEVEQDLAKRQLLSLNDTKYILIEFPFDHVPRYAEQLFYDLQLKGYIPVIAHPERNREIRENPSLLYHLVEKGAASQITSGSL--AGIFGKQLKAFSLR---LVEANLIHFVASDAHNVKTRNFHTQEALYVLEKEFG-SELPYMLTENAELLLRNQTIFRQPPQPVKRRKLFGFF
2WJE Chain:A ((5-247))MIDIHSHIVFDVDDGPKSREESKALLAESYRQGVRTIVSTSHRRKGMFETPEEKI--AENFLQVREIAKEVASDLVIAYGAEIYYTPDVLDKLEKKRIPTLNDSRYALIEFSMNTPYRDIHSALSKILMLGITPVIAHIERYDALENNEKRVRELIDMGCYTQVNSSHVLKPKLFGERYKFMKKRAQYFLEQDLVHVIASDMHNLDGRPPHMAEAYDLVTQKYGEAKAQELFIDNPRKIVMDQLI-----------------


General information:
TITO was launched using:
RESULT:

Template: 2WJE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1262 -9359 -7.42 -39.83
target 2D structure prediction score : 0.62
Monomeric hydrophicity matching model chain A : 0.78

3D Compatibility (PKB) : -7.42
2D Compatibility (Sec. Struct. Predict.) : 0.62
1D Compatibility (Hydrophobicity) : 0.78
QMean score : 0.396

(partial model without unconserved sides chains):
PDB file : Tito_2WJE.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2WJE-query.scw
PDB file : Tito_Scwrl_2WJE.pdb: