Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMREEEKKTSQVKKLQQFFRKRWVFPAIYLVSAAVILTAVLWYQSVSNDEVKDQLADNGGNSAYDNNDDAVEVGKSMENVAMPVVDSENVSVVKKFYETDAAKEEKEAALVTYNNTYSLSKGIDLAEKDGKDFDVSASLSGTVVKAEKDPVLGYVVEVEHADGLSTVYQSLSEVS--VEQGDKVKQNQVIGKSGKNLYSEDSGNHVHFEIRKDGVAMNPLNFMDKPVSSIEKAATQETEESIQQSSEKKDGSTEKGTEEKSGEKKDDSTDKSGSKESSTTEDTEQS
4RNZ Chain:A ((221-342))------------------------------------------------------------------------------------------------------------------------GVDYAAKHGSL--IHSASDGRVGFMGVKAGYGKVVEI-HLNELRLVYAHMSAFANGLKKGSFVKKGQIIGRVG------STGPHLHFGVYKNSRPINPLGYIRTAKSKLHGKQREVFLEKAQRSKQK--------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4RNZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 458 5510 12.03 47.50
target 2D structure prediction score : 0.57
Monomeric hydrophicity matching model chain A : 0.66

3D Compatibility (PKB) : 12.03
2D Compatibility (Sec. Struct. Predict.) : 0.57
1D Compatibility (Hydrophobicity) : 0.66
QMean score : 0.455

(partial model without unconserved sides chains):
PDB file : Tito_4RNZ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4RNZ-query.scw
PDB file : Tito_Scwrl_4RNZ.pdb: