Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRGGNRLGAGRKVIPESEKKKRKSVYITDKLYTRIMDTDIENCNNFSQKCMALIELAMENLNKNNQEHSVKRNNILMVRDTKSTYNKTNNNFEKQNRGIKLTFIDLFAGIGGIRLGFEDKYTKCVFSSEWDKYAAQTYEANYGEKPHGDITKINENDIPDQDVLLAGFPCQPFSNIGKREGFAHERRNIIFDVLRILKKKQPKMFLLENVKGLLTNDNGNTFRVILDNLKSLGYSVFYEVMDAQNFGLPQRRERIVIVGFHPDLGINDFSFPKGN-----------PDNKVPI------NAILEHNPTGYSISKRLQESYLFKKDDGKPQIVDFRCTYQVNTLVASYHKIQRLTGTFVKDGETGLRLFSELELKRLMGFPVDFKVPVSRTQMYRQFGNSVAVPMIKAVAGAMKERLLLAEMQVLKK
6MHT Chain:A ((6-315))--------------------------------------------------------------------------------------------DKQLTGLR--FIDLFAGLGGFRLALESCGAECVYSNEWDKYAQEVYEMNFGEKPEGDITQVNEKTIPDHDILCAGFPCQAFSISGKQKGFEDSRGTLFFDIARIVREKKPKVVFMENVKNFASHDNGNTLEVVKNTMNELDYSFHAKVLNALDYGIPQKRERIYMICFRNDLNIQNFQFPKPFELNTFVKDLLLPDSEVEHLVIDRKDLVMTNQEIEQTTPKTVRLGIVGKGGQGE-RIYSTRGI--AITLSAYGGGIFAKTGGYLVNGKT--RKLHPRECARVMGYPDSYKVHPSTSQAYKQFGNSVVINVLQYIA-----------------


General information:
TITO was launched using:
RESULT:

Template: 6MHT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1362 -84396 -61.96 -288.04
target 2D structure prediction score : 0.57
Monomeric hydrophicity matching model chain A : 0.75

3D Compatibility (PKB) : -61.96
2D Compatibility (Sec. Struct. Predict.) : 0.57
1D Compatibility (Hydrophobicity) : 0.75
QMean score : 0.535

(partial model without unconserved sides chains):
PDB file : Tito_6MHT.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-6MHT-query.scw
PDB file : Tito_Scwrl_6MHT.pdb: