Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMITESRQMLDKRNRPLRDLRISVTDRCNFRCTYCMPAELFGPDYPFLKKEELLSFEELERLATLFVTRF-GVEKIRLTGGEP-LMRKDMPELIKKLARIPGIRDI----AMTTNGSLL-PVYAKRLKEAGLKRVTISLDS-LEDERFKKINGRGV-SVSKVLEGIEAAKQAGLGVKINMVVQKGVNEKDILPMARYFKEKGH-ILRFIEFMDVGNTNQWEKKDVMTKAEIIDLINKHMPVEPIAPNYIGEVASRFRYLDGSGEIGVISSVSDAFCGSCNRARLSARGELFTCLFASSGFDLRAPVRQELSDDELSEMIGTVWKNRIDQYSVDRTLSKASGKKKVEMSYIGG
4K36 Chain:A ((3-204))--------------PLSLLIKPASSGCNLKCTYCFYHSL--SDN--VKSYGIMRDEVLESMVKRVLNEANGHCSFAFQGGEPTLAGLEFFEKLMELQRKHNYKNLKIYNSLQTNGTLIDESWAKFLSENKF-LVGLSMDGPKEIHNLNRKDCCGLDTFSKVERAAELFKKYKVEFNILCVVTSNT-ARHVNKVYKYFKEKDFKFLQFINCLD-------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4K36.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 865 8647 10.00 47.51
target 2D structure prediction score : 0.72
Monomeric hydrophicity matching model chain A : 0.64

3D Compatibility (PKB) : 10.00
2D Compatibility (Sec. Struct. Predict.) : 0.72
1D Compatibility (Hydrophobicity) : 0.64
QMean score : 0.426

(partial model without unconserved sides chains):
PDB file : Tito_4K36.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4K36-query.scw
PDB file : Tito_Scwrl_4K36.pdb: