Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSKRTAFVMGASQGIGKAIALKLADQHFSLVINSRNLDNIESVKEDILAKHPEASVIV-LAGDMSDQHTRAGIFQKIESQCGRLDVLINNIPGGAPDTFDNCNIEDMTATFTQKTVAYIDAIKRASSLMKQNEFGRIINIVGNLWKEPGANMFTNSMMNAALINASKNISIQLAPHNITVNCLNPGFIATDRYHQFVENVMKKNSISKQKAEEQIASGIPMKRVGSAEETAALAAFLASEEASYITGQQISADGGSMKSI
1O5I Chain:A ((20-246))---KGVLVLAASRGIGRAVADVLSQEGAEVTICARN--------EELLKRSGHRYVVCDLRKDLDL------LFEKVKE----VDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISPIENLYTSNSARMALTGFLKTLSFEVAPYGITVNCVAPGWTETERVKELLSEEKKK----------QVESQIPMRRMAKPEEIASVVAFLCSEKASYLTGQTIVVDGGLSK--


General information:
TITO was launched using:
RESULT:

Template: 1O5I.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1135 -49676 -43.77 -219.80
target 2D structure prediction score : 0.66
Monomeric hydrophicity matching model chain A : 0.79

3D Compatibility (PKB) : -43.77
2D Compatibility (Sec. Struct. Predict.) : 0.66
1D Compatibility (Hydrophobicity) : 0.79
QMean score : 0.518

(partial model without unconserved sides chains):
PDB file : Tito_1O5I.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1O5I-query.scw
PDB file : Tito_Scwrl_1O5I.pdb: