Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTKGLKIVTIGGGSS-YTPELVEGFIKRYDELPVRELWLVDIPEGEEK--LNIVGTLAKRMVEKAGVPIDIHLTLDRRKALKDADFVTTQFRVGLLQARAKDERIPLKYGVIGQETNGPGGLFKGLRTIPVILEIAKDIEELCPNAWLVNFTNPAGMVTEALLRYSNLKKVVGLCNVPIGIKMGVAKALDVDVDRVEVQFAGLNHMVFGLDVFLDGVSVKEQVIEAMGDPKNAMTMKNISGAEWEPDFLKALNVIPCGYHRYYFKTKEMLEHELEASQTEGTRAEVVQKVEKELFELYKDPNLAIKPPQLEKRGGAYYSDAACNLISSIYNDKHDIQPVNTINNGAIASIPDDSAVEVNCVMTKTGPKPIAVGDLPVSVRGLVQQIKSFERVAAEAAVTGDYQTALLAMTINPLVPSDTVAKQILDEMLEAHKAYLPQFFNKIEA
1S6Y Chain:A ((4-441))---RLKIATIGGGSSYTPELVEGLIKRY-HELPVGELWLVDI--PEGKEKLEIVGALAKRMVEKAGVPIEIHLTLDRRRALDGADFVTTQFRVGGLEARAKDERIPLKYGVIGQETNGPGGLFKGLRTIPVILDIIRDMEELCPDAWLINFTNPAGMVTEAVLRYTKQEKVVGLCNVPIGMRMGVAKLLGVDADRVHIDFAGLNHMVFGLHVYLDGVEVTEKVIDLVAHP-----------LGWEPDFLKGLKVLPCPYHRYYFQTDKMLAEELEAAKTKGTRAEVVQQLEKELFELYKDP-----------RGGAYYSDAACSLISSIYNDKRDIQPVNTRNNGAIASISAESAVEVNCVITKDGPKPIAVGDLPVAVRGLVQQIKSFERVAAEAAVTGDYQTALVAMTINPLVPSDTIAKQILDEMLEAHKEYLPQFF-----


General information:
TITO was launched using:
RESULT:

Template: 1S6Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 2320 -60521 -26.09 -147.97
target 2D structure prediction score : 0.67
Monomeric hydrophicity matching model chain A : 0.93

3D Compatibility (PKB) : -26.09
2D Compatibility (Sec. Struct. Predict.) : 0.67
1D Compatibility (Hydrophobicity) : 0.93
QMean score : 0.569

(partial model without unconserved sides chains):
PDB file : Tito_1S6Y.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1S6Y-query.scw
PDB file : Tito_Scwrl_1S6Y.pdb: