Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNILLVCAAGMSTSLLVSKMEKSAQEQGKDYTIWA----VSGDSVQNHIDKADVLLLGPQVRYMLPQLKKLGESKGVPVDVINTVHYGTCNGAEVLKSAEQLGHVS
1IIB Chain:A ((5-93))-HIYLFSSAGMSTSLLVSKMRAQAEKYEVPVIIEAFPETLAGEKGQN----ADVVLLGPQIAYMLPEIQRLLPNK--PVEVIDSLLYGKVDGLGVL----------


General information:
TITO was launched using:
RESULT:

Template: 1IIB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 329 -37840 -115.02 -445.18
target 2D structure prediction score : 0.68
Monomeric hydrophicity matching model chain A : 0.80

3D Compatibility (PKB) : -115.02
2D Compatibility (Sec. Struct. Predict.) : 0.68
1D Compatibility (Hydrophobicity) : 0.80
QMean score : 0.489

(partial model without unconserved sides chains):
PDB file : Tito_1IIB.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1IIB-query.scw
PDB file : Tito_Scwrl_1IIB.pdb: