Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMIMKMTHLNMKDFNKPNEPFVVFGRMIPAFENGVWTYTEERFSKPYFKQYEDDDMDVSYVEEEGKAAFLYYLENNCIGRIKIRSNWNGYALIED------------IAVAKDYRKKGVGTALLHKAIEWAKENHFC-GLMLETQDINISACHFYAKHHFIIGAVDTMLYSNFPTANEIAIFWYYKF
4R3K Chain:A ((43-144))--------------------------------------------------------VEHLKEYGLAFFVAIVDNSVVGYIMPRIEW-GFSNIKQLPSLVRKGHVVSIAVLEEYRRKGIATTLLEASMKSMKNDYNAEEIYLEVRVSNYPAIALYEKLNF---------------------------


General information:
TITO was launched using:
RESULT:

Template: 4R3K.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 322 -14205 -44.11 -159.61
target 2D structure prediction score : 0.60
Monomeric hydrophicity matching model chain A : 0.62

3D Compatibility (PKB) : -44.11
2D Compatibility (Sec. Struct. Predict.) : 0.60
1D Compatibility (Hydrophobicity) : 0.62
QMean score : 0.360

(partial model without unconserved sides chains):
PDB file : Tito_4R3K.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4R3K-query.scw
PDB file : Tito_Scwrl_4R3K.pdb: