Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTAPNEPGALSKGDGPNADGLVDRGGAHRAATGPGRIPDAGDPPPWQRAATRQSQAGHRQPPPVSHPEGRPTNPPAAADARLNRFISGASAPVTGPAAAVRTPQPDPDASLGCGDGSPAEAYASELPDLSGPTPRAPQRNPAPARPAEGGAGSRGDSAAGSSGGRSITAESRDARVQLSARRSRGPVRASMQIRRIDPWSTLKVSLLLSVALFFVWMITVAFLYLVLGGMGVWAKLNSNVGDLLNNASGSSAELVSSGTIFGGAFLIGLVNIVLMTALATIGAFVYNLITDLIGGIEVTLADRD |
| 3PIO Chain:A ((19-94)) | -------------------------------------------------------------------------------------------------------------------------------DFSGLTKKRPEKALTEALPKTGGRNNRGRITSRFIGG----GHKRLYRIIDFKRRDKSGVNAKVAAIEYDPNRSARIALL------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3PIO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 13238 for 329 contacts (40.2/contact) +
2D Compatibility (PS) -7616 + (NN) 1063 + (LL) 9356
1D Compatibility (HY) -1600 + (ID) 1150
Total energy: 13291.0 ( 40.40 by residue)
QMean score : 0.372
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