Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQQTAWAPRTSGIAGCGAGGVVMAIASVTLVTDTPGRVLTGVAALGLILFASATWRARPRLAITPDGLAIRGWFRTQLLRHSNIKIIRIDEFRRYGRLVRLLEIETVSGGLLILSRWDLGTDPVEVL-DALTAAGYAGRGQR
3B0Y Chain:A ((326-366))
-----------------------------------------------------------------------------------------------GRLPKLLELPQVKGDLQVHSTYSDGQNTLEELWEAAKTMGY------
General information:
TITO was launched using:
RESULT:
Template:
3B0Y.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -2828 for 158 contacts (-17.9/contact) +
2D Compatibility (PS) -4287 + (NN) -1975 + (LL) 7432
1D Compatibility (HY) -2000 + (ID) 800
Total energy: -4458.0 ( -28.22 by residue)
QMean score : 0.025
(partial model without unconserved sides chains):
PDB file :
Tito_3B0Y.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3B0Y-query.scw
PDB file :
Tito_Scwrl_3B0Y.pdb
: