Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPKSKVRKKNDFTVSAVSRTPMKVKVGPSSVWFVSLFIGLMLIGLIWLMVFQLAAIGSQAPTALNWMAQLGPWNYAIAFAFMITGLLLTMRWH
1EM6 Chain:A ((536-571))
---AKVKQENKLKFSQFLETEYKVKINPSSMFDVQV---------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1EM6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 6774 for 134 contacts (50.6/contact) +
2D Compatibility (PS) -3496 + (NN) -1431 + (LL) 6076
1D Compatibility (HY) -4000 + (ID) 600
Total energy: 3323.0 ( 24.80 by residue)
QMean score : 0.054
(partial model without unconserved sides chains):
PDB file :
Tito_1EM6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1EM6-query.scw
PDB file :
Tito_Scwrl_1EM6.pdb
: