Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRILVVDNYDSFVFNLVQYLGQLGIEAEVWRNDDHRLSDEAAVAGQFDGVLLSPGPGTPERAGASVSIVHACAAAHTPLLGVCLGHQAIGVAFGATVDRAPELLHGKTSSVFHTNVGVLQGLPDPFTATRYHSLTILPKSLPAVLRVTARTSSGVIMAVQHTGLPIHGVQFHPESILTEGGHRILANWLTCCGWTQDDTLVRRLENEVLTAISPHFPTSTASAGEATGRTSA
2LXN Chain:A ((2-186))
--IVILDNGGQYVHRIHRSLKYIGVSSKIVPNTTPL--EEIESNKEVKGIILSGGPDI-EKAKNCIDIA---LNAKLPILGICLGHQLIALAYGGEVGRAEAEEYALTKVYVDKENDLFKNVPREFNAWASHKDEV--KKVPEGFEILAHSDICQVEAMKHKTKPIYGVQFHPEVAHTEYGNEILKNFCKVCGYK-------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2LXN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -124180 for 1599 contacts (-77.7/contact) +
2D Compatibility (PS) -19491 + (NN) -3245 + (LL) 2684
1D Compatibility (HY) -12800 + (ID) 2900
Total energy: -159932.0 ( -100.02 by residue)
QMean score : 0.410
(partial model without unconserved sides chains):
PDB file :
Tito_2LXN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2LXN-query.scw
PDB file :
Tito_Scwrl_2LXN.pdb
: