Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTDDADLDLVRRTFAAFARGDLAELTQCFAPDVEQFVPGKHALAGVFRGVDNVVACLGDTAAAADGTMTVTLEDVLSNTDGQVIAVYRLRASRAGKVLDQREAILVTVAGGRITRLSEFYADPAATESFWA
3G16 Chain:A ((7-129))
LSRAAMEKVIRTYYDGCNEADEAKMIACFVPEAVHYFPAG-MYGGAFRGAAQI-AHRWRTAVETLGSYWTIDALVIDAETAEAAIEWTHFKTNQDKVLRGAECVEFDRASGLIREIRAFYASPQA------
General information:
TITO was launched using:
RESULT:
Template:
3G16.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -45343 for 899 contacts (-50.4/contact) +
2D Compatibility (PS) -13688 + (NN) -5881 + (LL) 796
1D Compatibility (HY) -4000 + (ID) 1450
Total energy: -69566.0 ( -77.38 by residue)
QMean score : 0.432
(partial model without unconserved sides chains):
PDB file :
Tito_3G16.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3G16-query.scw
PDB file :
Tito_Scwrl_3G16.pdb
: