Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLSDDELTGLDEFALLAENAEQAGVNGPLPEVERVQAGAISALRWGGSA-PRVIFLHGGGQNAHTWDTVIVGL---GEPALAVDLPGHGHSAWRED-GNYSPQLNSETLAPVLRELAPGAEFVVGMSLGGLTAIRLAAMAPDLVGELVLVDVTPSALQRHAELTAEQRGTVA-LMHGEREFPSFQAMLDLTIAAAPHRD-VKSLRRGV-FHNSRRL---DNGNWVWRYDAIRTFGDFAGL----------WDDVDALSAPITLVRGGSSGFVTDQDTAELHRRATHFRGVHIVEKSGHSVQSDQPRALIEIVRGVLDTR |
3QIT Chain:A ((13-271)) | ---------------------------------------ICLCSWGSPEHPVVLCIHGILEQGLAWQEVALPLAAQGYRVVAPDLFGHGRSSHLEMVTSYSSLTFLAQIDRVIQELPDQPLLLVGHSMGAMLATAIASVRPKKIKELILVELPLPAEE---ESAVNQLTTCLDYLSSTPQHPIFP---DVATAASRLRQAIPSLSEEFSYILAQRITQPNQGGVRWSWDAIIRTRSILGLNNLPGGRSQYLEMLKSIQVPTTLVYGDSSKLNRPEDLQQ--QKMTMTQAKRVFLSGGHNLHID---------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3QIT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -92678 for 1801 contacts (-51.5/contact) +
2D Compatibility (PS) -24880 + (NN) -4393 + (LL) 4980
1D Compatibility (HY) -15600 + (ID) 3350
Total energy: -135921.0 ( -75.47 by residue)
QMean score : 0.395
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