Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPVVTAVGRRRGFAMPWVSTARSGAVMLANYSAGVCGRVSSPGLNVRKMCLKANTPGAVTWLDTPKRFLSTQTASRCMAVNSSDVVTGRIDPQVLHTPLNTDVDGYAHAMHSSINSGPLEYLPATFSVFPALGDVGDLGGGVGAATYALDRLSNMRSGACVGGGESPWRSLMT |
| 2OQJ Chain:C ((7-17)) | -------------------------------------------------------------------------------------------------------------------------------------------------------VLDMRSGTCLA----------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2OQJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -1445 for 34 contacts (-42.5/contact) +
2D Compatibility (PS) -1166 + (NN) 129 + (LL) 7800
1D Compatibility (HY) -1600 + (ID) 250
Total energy: 3468.0 ( 102.00 by residue)
QMean score : 0.078
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