Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTRRTGQRWRGTLPGRRPWTRPAPATCRRHLAFVELRHYFARVMSSAIGSVARWIVPLLGVAAVASIGVIADPVRVVRAPALILVDAANPLAGKPFYVDP-ASAAMVAARNANPPNAELTS--VANTPQSYWLDQAFPPATVGGTVARYTGAAQAAGAMPVLTLYGIPHRDCGSYASGGFATGTDYRGWIDAVASGLGSSPATIIVEPDALAMADCLSPDQRQERFDLVRYAVDTLTRDPAAA-VYVDAGHSRWLSAEAMAARLNDVGVGR-ARGFSLNVSNFYTTDEEIGYGEAI-SGLTNGS-HYVIDTSRNGAGPAPDAPLNWCNPSGRALGAPPTTATAGAHADAYLWIKRPGESDGTCGRGEPQAGRFVSQYAIDLAHNAGQ |
| 2BOE Chain:X ((3-283)) | ---------------------------------------------------------------------------------------------SPFYVNPNMSSAEWVRNNPNDPRTPVIRDRIASVPQGTWFAH-HNPGQITGQVDALMSAAQAAGKIPILVVSNAPGRDCG----GGAPSHSAYRSWIDEFAAGLKNRPAYIIVEPDLISLMSSCMQHVQQEVLETMAYAGKALKAGSSQARIYFDAGHSAWHSPAQMASWLQQADISNSAHGIATNTSNYRWTADEVAYAKAVLSAIGNPSLRAVIDTSRNGNGPAGN---EWCDPSGRAIGTPSTTNTGDPMIDAFLWIKLPGEADG-CIAG---AGQFVPQAAYEMA----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2BOE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -121131 for 2350 contacts (-51.5/contact) +
2D Compatibility (PS) -29405 + (NN) -16603 + (LL) 7996
1D Compatibility (HY) -16800 + (ID) 6000
Total energy: -181943.0 ( -77.42 by residue)
QMean score : 0.540
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