Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTKWTAADIPDQTGRTAVITGANTGLGFETAAALAAHGAHVVLAVRNLDKGKQAAARITEATPGAEVELQELDLTSLASVRAAAAQLKSDHQRIDLLINNAGVMYTP--RQTTADGFEMQFGTNHLGHFALTGLLIDRLLPVAGSRVVTISSVGHRIRAAIHFDDLQWERRYRRVAA--YGQAKLANLLFTYELQRRLAPGGTTIAVASHPGVSNTEVVRNMPRPLVAVAAILAPLMQDAELGALPTLRAATDPAVRGGQYFGPDGFGEIRGYPKVVASSAQSHDEQLQRRLWAVSEELTGVVYPVG |
4NBU Chain:A ((14-204)) | --------------KVAIITGAANGIGLEAARVFMKEGAKVVIADFNEAAGKEA----VEANPG--VVFIRVDVSDRESVHRLVENVAERFGKIDILINNAGITRDSMLSKMTVDQFQQVINVNLTGVFHCTQAVLPYMAEQGKGKIINTSSV---------------TGTYGNVGQTNYAAAKAGVIGMTKTWAKELARKGINVN-AVAPGFTETAMVAEVPEKVI-------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4NBU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -75038 for 1551 contacts (-48.4/contact) +
2D Compatibility (PS) -20504 + (NN) -11018 + (LL) 8072
1D Compatibility (HY) -11600 + (ID) 2950
Total energy: -113038.0 ( -72.88 by residue)
QMean score : 0.454
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