Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSNANFSILVDFAAGGLVLASVLIVWRRDLRAIVRLLAWQGAALAAIPLLRGIRDNDRALIAVGIAVLALRALVLPWLLARAVGAEAAAQREATPLVNTASSLLITAGLTLTAFAITQPVVNLEPGVTINAVPAAFAVVLIALFVMTTRLHAVSQAAGFLMLDNGIAATAFLLTAGVPLIVELGASLDVLFAVIVIGVLTGRLRRIFGDADLDKLRELRD |
| 2MMU Chain:A ((38-92)) | ----------------------------------------------------------------------------------------------------IGLMLIGLIWLMVFQL----------LGPWNYAIAFAFMITGLLLT-MRW---------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2MMU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -21453 for 192 contacts (-111.7/contact) +
2D Compatibility (PS) -3978 + (NN) -1328 + (LL) 16500
1D Compatibility (HY) -5600 + (ID) 400
Total energy: -16259.0 ( -84.68 by residue)
QMean score : 0.092
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