Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAKNQNRIRNRWELITCGLGGHVTYAPDDAALAARLRASTGLGEVWRCLRCGDFALGGP-----QGRGAPEDAPLIMRGKALRQAIII---RALGVERLVRALVLALAAWAVWEFRGARGAIQATLDRDLPVLRAAGFKVDQMTVIHALEKALAAKPSTLALITGMLAAYAVLQAVEGVGLWLLKRWGEYFAVVATSIFLPLEVHDLAKGITTTRVVTFSINVAAVVYLLISKRLFGVRGGRKAYDVERRGEQLLDLERAAMLT |
| 2FF4 Chain:A ((12-96)) | ----------------------------------------------------DFGLLGPLQMTIDGTPVPSGTP---KQRAVLAMLVINRNRPVGVDALITAL------WEEWPPSGARASIHSYVSNLRKLLGGAG--IDPRVVLAA-------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2FF4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -29268 for 426 contacts (-68.7/contact) +
2D Compatibility (PS) -8265 + (NN) -2630 + (LL) 16248
1D Compatibility (HY) -6400 + (ID) 1400
Total energy: -31715.0 ( -74.45 by residue)
QMean score : 0.366
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