Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIALPALEGVEHRHVDVAEGVRIHVADAGPADGPAVMLVHGFPQNWWEWRDLIGPLAADGNRVLCPDLRGAGWSSAPR--SRYTKTEMADDLAAVLDGLGVAKVKLVAHDWGGPVAFIMMLRHPEKVTGFFGVNTVAPWVKRD-----LGMLRNMWRFWYQIPMSLPVIGPRVISDPKGRYFRLL------TGWVG-------GGFRV--PDD----------DVRLYLDCMREPGHAEAGSRWYRTFQTREMLRWLRGEYNDARVDVPVRWLHGTGDPVITPDLLDGYAERASDFEVELVDGVGHWIVEQRPELVLDRVRAFLAAGTEQRD |
| 1EK2 Chain:A ((235-533)) | ---------VSHGYVTVKPGIRLHFVEMG--SGPALCLCHGFPESWFSWRYQIPALAQAGFRVLAIDMKGYGDSSSPPEIEEYAMELLCKEMVTFLDKLGIPQAVFIGHDWAGVMVWNMALFYPERVRAVASLNT--PFMPPDPDVSPMKVIRSIPVFNYQLYFQEPGVAEAELEKNMSRTFKSFFRASDETGFIAVHKATEIGGILVNTPEDPNLSKITTEEEIEFYIQQFKKTGF-RGPLNWYRN--TERNWKW-SCKGLGRKILVPALMVTAEKDIVLRPEMSKNMEKWIPFLKRGHIEDCGHWTQIEKPTEV---------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1EK2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -174118 for 2225 contacts (-78.3/contact) +
2D Compatibility (PS) -28461 + (NN) -14865 + (LL) 3116
1D Compatibility (HY) -20800 + (ID) 4050
Total energy: -239178.0 ( -107.50 by residue)
QMean score : 0.417
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