Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNAPKLVIGANGFLGSHVTRQLVADCAPQKGEVRAMVRPAANTRSIDDLPLTRFHGDVFDTATVAEAMAGCDDVY--YCVVDTRAWLRD-PSPLFRTNVAGLRNVLDVATDASLRRFVFTSSYATVGRRR----GHVATEEDRVDTRKVTPYVRSRVAAEDLVLQYAHDAGLPAVAMCVSTTYGGGDWGRTPHGAFIAGAVFGRLPFTMRGIRLEAVGVDDAARALILAAERGRNGERYLISERMMPLQEVVRIAADEAGVPPPRWSISVPVLYALGALGSLRARLTGKDTELSLASVRMMRSEADVDHGKAVRELGWQPRPVEESIREAARFWAAMRTVGKDPAAS |
| 2X4G Chain:A ((17-316)) | ------VLGATGLLGHHAARAIRAAGH----DLVLIHRPSSQIQRLAYLEPECRVAEMLDHAGLERALRGLDGVIFS----------EEVASALGQTN-----PFYAACLQARVPRILYVGSAYAMPRHPQGLPGHEGLFYDSLPSGK-SSYVLCKWALDEQAREQARN-GLPVVIGIPGMVLGELDIGPTT-GRVITAIGNGEMTHYVAGQR-NVIDAAEAGRGLLMALERGRIGERYLLTGHNLEMADLTRRIAELLGQPAPQ-PMSMAMARALATLGRL----------------EVMAGGQFLDGRKAREELGF----------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2X4G.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -127306 for 2121 contacts (-60.0/contact) +
2D Compatibility (PS) -28284 + (NN) -6932 + (LL) 5828
1D Compatibility (HY) -12000 + (ID) 3900
Total energy: -172594.0 ( -81.37 by residue)
QMean score : 0.528
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