Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTRTRSGSLAAGGLNWASLPLKLF--AGGNAKFWHPADIDFTRDRADWEKLSDDERDYATRLCTQFIAGEEAVTEDIQPFMSAMRAEGRLADEMYLTQFAFEEAKHTQVFRMWLDAVGISE-DLHRYLDDLPAYRQIFYAELPECLNALSADPSPAAQVRASVTYNHIVEGMLALTGYYAWHKICVERAILPGMQELVRRIGDDERRHMAWGTFTCRRHVAADDANWTVFETRMNELIPLALRLIEEGFALYGDQPPFDLSKDDFLQYSTDKGMRRFGTISNARGRPVAEIDVDYSPAQLEDTFADEDRRTLAAASA |
4HR5 Chain:A ((28-250)) | -------------IDWEHPMFKLYEKAKRNGK-WNPADIDFSQDQKDFASLTSEEKISALPLVAGFSAG----TLDILPMAHALARQGRLEDVLFLTTFMHDEAKHVEMFSRWQQAVGIGQMDLSVFHND--HYKRIFYEALPEAMNRLYADDSPEAVIRAATVYNMIVEGTLAESGYYTFRQIYKKAGLFPGLLQGIDYLNMDEGRHIQFGIYTIQRIVNEDERYYELFIRYMDELWP------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4HR5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -114417 for 1635 contacts (-70.0/contact) +
2D Compatibility (PS) -22694 + (NN) -6577 + (LL) 5620
1D Compatibility (HY) -18800 + (ID) 4550
Total energy: -161418.0 ( -98.73 by residue)
QMean score : 0.482
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