Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSKTVLILGAGVGGLTTADTLRQLLPPEDRIILVDRSFDGTLGLSLLWVLRGWRRPDDVR--VRPTAASLPGVEMVTATVAHIDIAAQ-VVHTDNSVIGYDALVIALGAALNTDAVPGLSDALDADVAGQFYTLDGAAELRAKVEAL--EHGRIAV-AIAGVPFKCPAAPFEAAFLIAAQLGDRYATGTVQIDTF-TPDPLPMPVAGPEVGEA---LVSMLKDHGVGFHPRKALARVDEAARTMHFGDGTSE-------PFDLLAVVPPH--VPSAAARSAGLSESGWIPVDPRTLSTSADNVWAIGDAT----VLTLPNGKPLPKAAVFAEAQAAVVAHGVARHLGYDVAERHF-TGTGACYVETGDHQAAKGDGDFFAPSAPSVTLYPPSREFHEEKVAQELAWLTRWKT |
| 3SZF Chain:A ((4-406)) | -SAHVVILGAGTGGMPAAYEMKEALGSGHEVTLISANDYFQFVPSNPWVGVGWKERDDIAFPIR-HYVERKGIHFIAQSAEQIDAEAQNITLADGNTVHYDYLMIATGPKLAFENVPG-SDPHEGPVQ-SICTVDHAERAFAEYQALLREPGPIVIGAMAGA--SCFGPAYEYAMIVASDLKKRGMRDKIPSFTFITSEPYIGALGIQGVGDSKGILTKGLKEEGIEAYTNCKVTKVEDNKMYVTQVDEKGETIKEMVLPVKFGMMIPAFKGVPAVAGVEGLCNPGGFVLVDEHQRSKKYANIFAAGIAIAIPPVETTPVPTGAPKTGYMIESMVSAAVHNIKADLEGRKGEQTMGTWNAVCFADMGDRGAAFIALPQLKPRKVDVFAY--GRWVHLAKVAFEKYFIRKMK- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3SZF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -207024 for 3313 contacts (-62.5/contact) +
2D Compatibility (PS) -41650 + (NN) -23109 + (LL) -164
1D Compatibility (HY) -17200 + (ID) 5400
Total energy: -294547.0 ( -88.91 by residue)
QMean score : 0.417
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