Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRGIILAGGSGTRLYPITMGISKQLLPVYDKPMIYYPLTTLMMAGIRDIQLITTPHDAPGFHRLLGDGAHLGVNISYATQDQPDGLAQAFVIGANHIGADSVALVLGDNIFYGPGLGTSLKRFQSISGGA-IFAYWVANPSAYGVVEFGAEGMALSLEEKPVTPKSNYAVPGLYFYDNDVIEIARGLKKSARGEYEITEVNQVYLNQGRLAVEVLARGTAWLDTGTFDSLLDAADFVRTLERRQGLKVSIPEEVAWRMGWIDDEQLVQRARALVKSGYGNYLLELLERN |
5IDT Chain:A ((13-298)) | -KGIILAGGSGTRLHPATLAISKQLLPVYDKPMIYYPLSTLMLAGMRDVLVISTPQDTPRFQQLLGDGSQWGMNLQYAVQPSPDGLAQAFIIGEQFIGNAPSALVLGDNIYYGHDFQPLLKAADAQSSGATVFAYHVHDPERYGVVQFNAQGQAVSIEEKPKAPKSNYAVTGLYFYDQQVVDIAKAVKPSARGELEITSVNQAYMQQGQLNVQTMGRGYAWLDTGTHDSLLDASQFIATLENRQGLKVACPEEIAWRSGWINASQLEALVQPLTKNGYGQYLMQILK-- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 5IDT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -222460 for 2382 contacts (-93.4/contact) +
2D Compatibility (PS) -30579 + (NN) -12456 + (LL) 228
1D Compatibility (HY) -31200 + (ID) 8850
Total energy: -305317.0 ( -128.18 by residue)
QMean score : 0.560
|
|
|