Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MHNNGRMLGVIGGSGFYT-FFGSDTRTVNSDTPYGQPSAPITIGTIGVHDVAFLPRHGAHHQYSAHAVPYRANMWALRALGVRRVFGPCAVGSLDPELEPGAVVVPDQLVDRTSGRADTYFDFG--GVHAAFADPYCPTLRAAVTGL-----PGVVDGGTMVVIQGPRFSTRAESQ-WFAAAGCNLVNMTGYPEAVLARELELCYAAIALVTDVDAGVAAGDGVKAADVFAAFGENIELLKRLVRAAIDRVADERTCTHCQHHAGVPLPFELP
1WTA Chain:A ((14-265))
-------VGVIGGSGLYDPGIVENPVEVKVSTPYGNPSDFIVVGDVAGVKVAFLPRHGRGHRIPPHAINYRANIWALKALGVKWVISVSAVGSLREDYRPGDFVVPDQFIDMTKNRRHYTFYDGPVTVHVSMADPFCEDLRQRLIDSGRRLGYTVHERGTYVCIEGPRFSTRAESRVWKDVFKADIIGMTLVPEINLACEAQLCYATLAMVTDYD--VWADRPVTAEEVERVMISNVERARRMLYDVIPKLAGEPELERCS------------
General information:
TITO was launched using:
RESULT:
Template:
1WTA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -187544 for 2051 contacts (-91.4/contact) +
2D Compatibility (PS) -26376 + (NN) -15426 + (LL) 620
1D Compatibility (HY) -22000 + (ID) 5450
Total energy: -256176.0 ( -124.90 by residue)
QMean score : 0.568
(partial model without unconserved sides chains):
PDB file :
Tito_1WTA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1WTA-query.scw
PDB file :
Tito_Scwrl_1WTA.pdb
: