Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRRGELWFA-------ATPGGDRPVLVLTRDPVADRIGAVVVVALT-RTRRGLV-SELELTAVENRVPSDCVVNFDNIHTLPRTAFRRRITRLSPARLHEACQTLRASTGC
4MZM Chain:A ((2-112))
IRRGDVYLADLSPVQGSEQGGVRPVVIIQNDTGNKYSPTVIVAAITGRINKAKIPTHVEIEKKKYKLDKDSVILLEQIRTLDKKRLKEKLTYLSDDKMKEVDNALMISLGL
General information:
TITO was launched using:
RESULT:
Template:
4MZM.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -64427 for 717 contacts (-89.9/contact) +
2D Compatibility (PS) -11295 + (NN) -5611 + (LL) 0
1D Compatibility (HY) -8000 + (ID) 1400
Total energy: -90733.0 ( -126.55 by residue)
QMean score : 0.634
(partial model without unconserved sides chains):
PDB file :
Tito_4MZM.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4MZM-query.scw
PDB file :
Tito_Scwrl_4MZM.pdb
: