Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSSGAGSDATGAGGVHAAGSGDRAVAAAVERAKATAARNIPAFDDLPVPADTANLREGADLNNALLALLPLVGVWRGEGEGRGPD-GDYRFGQQIVVSHDGGDYLNWESRSWRLTATGDYQEPGLREAGFWRFVADPYDPSESQAIELLLAHSAGYVELFYGRPRT-QSSWELVTDALARSRSGVLVGGAKRLYGIVEGGDLAYVEERVDADGGLVPHLSARLSRFVG
4YMY Chain:A ((34-174))----------------------------------------------------------------------LLGTWRGQGEGEYPTIPSFRYGEEIRFSHSGKPVIAYTQKTWKLESGA----PALAESGYFR-------PRPDGSIEVVIACSTGLVEVQKGTYNVDEQSIKLKSDLVGNASK---VKEISREFELVD-GKLSYVVRLSTTTNPLQPALKAILDKL--


General information:
TITO was launched using:
RESULT:

Template: 4YMY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -25366 for 989 contacts (-25.6/contact) +
2D Compatibility (PS) -14294 + (NN) -3209 + (LL) 3880
1D Compatibility (HY) -11200 + (ID) 2300
Total energy: -52489.0 ( -53.07 by residue)
QMean score : 0.304

(partial model without unconserved sides chains):
PDB file : Tito_4YMY.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4YMY-query.scw
PDB file : Tito_Scwrl_4YMY.pdb: