Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MARCDVLVSADWAESNLHAPKVVFVEVDEDTSAYDRDHIAGAIKLDWRTDLQDPVKRDFVDAQQFSKLLSERGIANEDTVILYGGNNNWFAAYAYWYFKLYGHEKVKLLDGGRKKWELDGRPLSSDPVSRPVTSY-TASPPDNTIRAFRDEVLAAINVKNLIDVRSPDEFSGKILAPAHLPQEQSQRPGHIPGAINVPWSRAANEDGTFKSDEELAKLYADAGLDNSKETIAYCRIGERSSHTWFVLRELLGHQNVKNYDGSWTEYGSLVGAPIELGS |
| 3P3A Chain:A ((16-289)) | -AHPERLVTADWLASNLGRPGLVIVESDEDVLLYDTGHIPGAVKIDWHTDLNDPAVRDYINGEQFAALMDRKGVTRDDTVVIYGDKSNWWAAYAMWVFHLFGHPDVRLLDGGRDLWVSTGRDTTLEVPTRQTSGYPVVERNDAPIRAFKDDVLRVLGKEPLIDVRSPQEYTGERT-----PEEGALRGGHIPTAVSVPWSKAAYDDGRFRARAELEEIYGFVKPDD--KPIVYCRIGERSSHTWFVLTYLLGHPNVRNYDGSWTEWGNAVRVPIVVG- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3P3A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -81565 for 2132 contacts (-38.3/contact) +
2D Compatibility (PS) -29117 + (NN) -17702 + (LL) 584
1D Compatibility (HY) -23600 + (ID) 6850
Total energy: -158250.0 ( -74.23 by residue)
QMean score : 0.443
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